3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
AGACG*CC*GAAAAU
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7RR5_035 not in the Motif Atlas
Homologous match to J3_8P9A_058
Geometric discrepancy: 0.1049
The information below is about J3_8P9A_058
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_12393.2
Basepair signature
cWW-tSH-tHH-F-F-cWW-F-cWW
Number of instances in this motif group
3

Unit IDs

7RR5|1|C1|A|1654
7RR5|1|C1|G|1655
7RR5|1|C1|A|1656
7RR5|1|C1|C|1657
7RR5|1|C1|G|1658
*
7RR5|1|C1|C|1791
7RR5|1|C1|C|1792
*
7RR5|1|C1|G|1796
7RR5|1|C1|A|1797
7RR5|1|C1|A|1798
7RR5|1|C1|A|1799
7RR5|1|C1|A|1800
7RR5|1|C1|U|1801

Current chains

Chain C1
25S rRNA

Nearby chains

Chain LA
60S ribosomal protein L2-B
Chain Lg
60S ribosomal protein L34-A
Chain Lp
60S ribosomal protein L43-A

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2376 s