J3_7RYH_005

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CGAAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7RYH_005 not in the Motif Atlas

Homologous match to J3_4WF9_004

Geometric discrepancy: 0.2152

The information below is about J3_4WF9_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7RYH|1|A|C|1293
7RYH|1|A|G|1294
7RYH|1|A|A|1295
7RYH|1|A|A|1296
7RYH|1|A|A|1297
7RYH|1|A|G|1298
*
7RYH|1|A|C|1623
7RYH|1|A|A|1624
7RYH|1|A|G|1625
*
7RYH|1|A|C|1637
7RYH|1|A|A|1638
7RYH|1|A|A|1639
7RYH|1|A|G|1640

Current chains

Chain A

23S ribosomal RNA

Nearby chains