J3_7S0S_021
3D structure
- PDB id
- 7S0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GCC*GACUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 7S0S|1|C|U|2614, 7S0S|1|C|A|2650
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7S0S_021 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.0917
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7S0S|1|C|G|2506
7S0S|1|C|C|2507
7S0S|1|C|C|2508
*
7S0S|1|C|G|2608
7S0S|1|C|A|2609
7S0S|1|C|C|2610
7S0S|1|C|U|2611
7S0S|1|C|A|2612
7S0S|1|C|G|2613
7S0S|1|C|U|2614
7S0S|1|C|G|2615
7S0S|1|C|A|2616
7S0S|1|C|U|2617
7S0S|1|C|C|2618
7S0S|1|C|C|2619
*
7S0S|1|C|G|2645
7S0S|1|C|C|2646
7S0S|1|C|U|2647
7S0S|1|C|C|2648
7S0S|1|C|A|2649
7S0S|1|C|A|2650
7S0S|1|C|C|2651
Current chains
- Chain C
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L15
- Chain Y
- 50S ribosomal protein L27
- Chain d
- 50S ribosomal protein L33
- Chain f
- 50S ribosomal protein L35
Coloring options: