3D structure

PDB id
7SA4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Damaged 70S ribosome with PrfH bound
Experimental method
ELECTRON MICROSCOPY
Resolution
2.55 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
7SA4|1|2|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7SA4_021 not in the Motif Atlas
Homologous match to J3_4LFB_005
Geometric discrepancy: 0.1388
The information below is about J3_4LFB_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82572.1
Basepair signature
cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
Number of instances in this motif group
2

Unit IDs

7SA4|1|2|C|990
7SA4|1|2|U|991
7SA4|1|2|U|992
7SA4|1|2|G|993
*
7SA4|1|2|C|1045
7SA4|1|2|A|1046
7SA4|1|2|G|1047
*
7SA4|1|2|C|1210
7SA4|1|2|U|1211
7SA4|1|2|U|1212
7SA4|1|2|A|1213
7SA4|1|2|C|1214
7SA4|1|2|G|1215

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain s
30S ribosomal protein S14

Coloring options:


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