J3_7SAE_006

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAUG*CGA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_006 not in the Motif Atlas

Homologous match to J3_7RQB_007

Geometric discrepancy: 0.1241

The information below is about J3_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.3

Basepair signature

cWW-tSH-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

7SAE|1|A|C|1337
7SAE|1|A|G|1338
7SAE|1|A|A|1339
7SAE|1|A|A|1340
7SAE|1|A|U|1341
7SAE|1|A|G|1342
*
7SAE|1|A|C|1670
7SAE|1|A|G|1671
7SAE|1|A|A|1672
*
7SAE|1|A|U|1684
7SAE|1|A|A|1685
7SAE|1|A|A|1686
7SAE|1|A|G|1687

Current chains

Chain A

RNA (2434-MER)

Nearby chains