J3_7SAE_007

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAG*CGCAAAC*GUAG

Length

16 nucleotides

Bulged bases

7SAE|1|A|A|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_007 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.1878

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

7SAE|1|A|C|1344
7SAE|1|A|U|1345
7SAE|1|A|A|1346
7SAE|1|A|A|1347
7SAE|1|A|G|1348
*
7SAE|1|A|C|1650
7SAE|1|A|G|1651
7SAE|1|A|C|1652
7SAE|1|A|A|1653
7SAE|1|A|A|1654
7SAE|1|A|A|1655
7SAE|1|A|C|1656
*
7SAE|1|A|G|1665
7SAE|1|A|U|1666
7SAE|1|A|A|1667
7SAE|1|A|G|1668

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain d

50S ribosomal protein L34