J3_7SAE_009

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAU*AGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_009 not in the Motif Atlas

Homologous match to J3_7A0S_012

Geometric discrepancy: 0.1761

The information below is about J3_7A0S_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_20574.1

Basepair signature

cWW-F-F-tWH-cWW-tSS-F-tHS-F-cWW

Number of instances in this motif group

1

Unit IDs

7SAE|1|A|C|2818
7SAE|1|A|A|2819
7SAE|1|A|U|2820
*
7SAE|1|A|A|2831
7SAE|1|A|G|2832
7SAE|1|A|U|2833
7SAE|1|A|A|2834
7SAE|1|A|A|2835
7SAE|1|A|G|2836
*
7SAE|1|A|C|2914
7SAE|1|A|G|2915
7SAE|1|A|A|2916
7SAE|1|A|G|2917
7SAE|1|A|G|2918

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain D

50S ribosomal protein L3