J3_7SAE_011
3D structure
- PDB id
- 7SAE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 44SR70P Class1 ribosomal particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GC*GUGAAAAGCAC*GAGUGAAAGAGAUCC
- Length
- 28 nucleotides
- Bulged bases
- 7SAE|1|A|G|550, 7SAE|1|A|U|554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SAE_011 not in the Motif Atlas
- Homologous match to J3_4WF9_011
- Geometric discrepancy: 0.2245
- The information below is about J3_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17917.2
- Basepair signature
- cWW-tWH-cSS-cWW-tSH-tHH-cWW-F-F-tWW-tSS-cSS-tWW-tSH-tWH-cSW-F-tHS-cWW-F
- Number of instances in this motif group
- 10
Unit IDs
7SAE|1|A|G|30
7SAE|1|A|C|31
*
7SAE|1|A|G|521
7SAE|1|A|U|522
7SAE|1|A|G|523
7SAE|1|A|A|524
7SAE|1|A|A|525
7SAE|1|A|A|526
7SAE|1|A|A|527
7SAE|1|A|G|528
7SAE|1|A|C|529
7SAE|1|A|A|530
7SAE|1|A|C|531
*
7SAE|1|A|G|542
7SAE|1|A|A|543
7SAE|1|A|G|544
7SAE|1|A|U|545
7SAE|1|A|G|546
7SAE|1|A|A|547
7SAE|1|A|A|548
7SAE|1|A|A|549
7SAE|1|A|G|550
7SAE|1|A|A|551
7SAE|1|A|G|552
7SAE|1|A|A|553
7SAE|1|A|U|554
7SAE|1|A|C|555
7SAE|1|A|C|556
Current chains
- Chain A
- RNA (2434-MER)
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
Coloring options: