J3_7SAE_013

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAG*CGCCAUAGGA*UGUAG

Length

20 nucleotides

Bulged bases

7SAE|1|A|U|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_013 not in the Motif Atlas

Homologous match to J3_4WF9_015

Geometric discrepancy: 0.1134

The information below is about J3_4WF9_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_77124.1

Basepair signature

cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F

Number of instances in this motif group

4

Unit IDs

7SAE|1|A|U|340
7SAE|1|A|G|341
7SAE|1|A|A|342
7SAE|1|A|A|343
7SAE|1|A|G|344
*
7SAE|1|A|C|360
7SAE|1|A|G|361
7SAE|1|A|C|362
7SAE|1|A|C|363
7SAE|1|A|A|364
7SAE|1|A|U|365
7SAE|1|A|A|366
7SAE|1|A|G|367
7SAE|1|A|G|368
7SAE|1|A|A|369
*
7SAE|1|A|U|381
7SAE|1|A|G|382
7SAE|1|A|U|383
7SAE|1|A|A|384
7SAE|1|A|G|385

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24