J3_7SAE_015

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_015 not in the Motif Atlas

Homologous match to J3_7A0S_019

Geometric discrepancy: 0.0862

The information below is about J3_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.3

Basepair signature

cWW-tSH-tSH-tHH-F-F-cWW-F-cWW

Number of instances in this motif group

4

Unit IDs

7SAE|1|A|G|1470
7SAE|1|A|G|1471
7SAE|1|A|G|1472
7SAE|1|A|A|1473
7SAE|1|A|C|1474
7SAE|1|A|G|1475
*
7SAE|1|A|C|1612
7SAE|1|A|C|1613
*
7SAE|1|A|G|1616
7SAE|1|A|A|1617
7SAE|1|A|A|1618
7SAE|1|A|A|1619
7SAE|1|A|A|1620
7SAE|1|A|G|1621
7SAE|1|A|C|1622

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain C

50S ribosomal protein L2