J3_7SFR_007
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 7SFR|1|A|A|1844
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_007 not in the Motif Atlas
- Homologous match to J3_8VTW_005
- Geometric discrepancy: 0.1438
- The information below is about J3_8VTW_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44702.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7SFR|1|A|C|1437
7SFR|1|A|A|1438
7SFR|1|A|A|1439
7SFR|1|A|G|1440
*
7SFR|1|A|C|1840
7SFR|1|A|C|1841
7SFR|1|A|C|1842
7SFR|1|A|A|1843
7SFR|1|A|A|1844
7SFR|1|A|A|1845
7SFR|1|A|C|1846
*
7SFR|1|A|G|1855
7SFR|1|A|U|1856
7SFR|1|A|G|1857
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: