J3_7SFR_011
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_011 not in the Motif Atlas
- Homologous match to J3_8VTW_006
- Geometric discrepancy: 0.1194
- The information below is about J3_8VTW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89368.4
- Basepair signature
- cWW-tSH-tHW-F-cWW-tHH-cWW
- Number of instances in this motif group
- 3
Unit IDs
7SFR|1|A|U|2328
7SFR|1|A|U|2329
7SFR|1|A|G|2330
*
7SFR|1|A|C|2433
7SFR|1|A|U|2434
7SFR|1|A|A|2435
7SFR|1|A|A|2436
7SFR|1|A|C|2437
*
7SFR|1|A|G|2461
7SFR|1|A|G|2462
7SFR|1|A|A|2463
7SFR|1|A|C|2464
7SFR|1|A|A|2465
7SFR|1|A|G|2466
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L9
- Chain X
- 50S ribosomal protein L28
Coloring options: