3D structure

PDB id
7SSN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUG*CUAAC*GGACAG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7SSN_009 not in the Motif Atlas
Homologous match to J3_5J7L_044
Geometric discrepancy: 0.0807
The information below is about J3_5J7L_044
Detailed Annotation
Kink-turn 3-way junction
Broad Annotation
No text annotation
Motif group
J3_89368.5
Basepair signature
cWW-tSH-tHW-F-cWW-tHH-cWW
Number of instances in this motif group
3

Unit IDs

7SSN|1|1|C|2091
7SSN|1|1|U|2092
7SSN|1|1|G|2093
*
7SSN|1|1|C|2196
7SSN|1|1|U|2197
7SSN|1|1|A|2198
7SSN|1|1|A|2199
7SSN|1|1|C|2200
*
7SSN|1|1|G|2223
7SSN|1|1|G|2224
7SSN|1|1|A|2225
7SSN|1|1|C|2226
7SSN|1|1|A|2227
7SSN|1|1|G|2228

Current chains

Chain 1
23S rRNA

Nearby chains

Chain b
50S ribosomal protein L2
Chain x
50S ribosomal protein L28

Coloring options:


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