3D structure

PDB id
7SSN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAAG*CUAGUAA*UGAAUACG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7SSN_019 not in the Motif Atlas
Homologous match to J3_4LFB_002
Geometric discrepancy: 0.0999
The information below is about J3_4LFB_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_85722.1
Basepair signature
cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW
Number of instances in this motif group
5

Unit IDs

7SSN|1|3|C|936
7SSN|1|3|A|937
7SSN|1|3|A|938
7SSN|1|3|G|939
*
7SSN|1|3|C|1344
7SSN|1|3|U|1345
7SSN|1|3|A|1346
7SSN|1|3|G|1347
7SSN|1|3|U|1348
7SSN|1|3|A|1349
7SSN|1|3|A|1350
*
7SSN|1|3|U|1372
7SSN|1|3|G|1373
7SSN|1|3|A|1374
7SSN|1|3|A|1375
7SSN|1|3|U|1376
7SSN|1|3|A|1377
7SSN|1|3|C|1378
7SSN|1|3|G|1379

Current chains

Chain 3
16S rRNA

Nearby chains

Chain L
30S ribosomal protein S7
Chain N
30S ribosomal protein S9

Coloring options:


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