J3_7TOQ_031
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCACCAG*CCAGUAA*UGAUUAAGUCCCU
- Length
- 28 nucleotides
- Bulged bases
- 7TOQ|1|A18S|C|1216
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A18S|A|1214
7TOQ|1|A18S|C|1215
7TOQ|1|A18S|C|1216
7TOQ|1|A18S|A|1217
7TOQ|1|A18S|C|1218
7TOQ|1|A18S|C|1219
7TOQ|1|A18S|A|1220
7TOQ|1|A18S|G|1221
*
7TOQ|1|A18S|C|1645
7TOQ|1|A18S|C|1646
7TOQ|1|A18S|A|1647
7TOQ|1|A18S|G|1648
7TOQ|1|A18S|U|1649
7TOQ|1|A18S|A|1650
7TOQ|1|A18S|A|1651
*
7TOQ|1|A18S|U|1673
7TOQ|1|A18S|G|1674
7TOQ|1|A18S|A|1675
7TOQ|1|A18S|U|1676
7TOQ|1|A18S|U|1677
7TOQ|1|A18S|A|1678
7TOQ|1|A18S|A|1679
7TOQ|1|A18S|G|1680
7TOQ|1|A18S|U|1681
7TOQ|1|A18S|C|1682
7TOQ|1|A18S|C|1683
7TOQ|1|A18S|C|1684
7TOQ|1|A18S|U|1685
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS05
- Ribosomal protein S5
- Chain AS16
- uS9
- Chain AS26
- eS26
- Chain AS28
- 40S ribosomal protein S28
- Chain PTRN
- Transfer RNA; tRNA
Coloring options: