J3_7TOQ_036
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CGGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 7TOQ|1|A25S|C|2470, 7TOQ|1|A25S|A|2472, 7TOQ|1|A25S|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|A|2451
7TOQ|1|A25S|G|2452
7TOQ|1|A25S|A|2453
7TOQ|1|A25S|U|2454
7TOQ|1|A25S|G|2455
7TOQ|1|A25S|G|2456
*
7TOQ|1|A25S|C|2465
7TOQ|1|A25S|G|2466
7TOQ|1|A25S|U|2467
7TOQ|1|A25S|U|2468
7TOQ|1|A25S|C|2469
7TOQ|1|A25S|C|2470
7TOQ|1|A25S|G|2471
7TOQ|1|A25S|A|2472
7TOQ|1|A25S|A|2473
7TOQ|1|A25S|G|2474
7TOQ|1|A25S|G|2475
7TOQ|1|A25S|G|2476
*
7TOQ|1|A25S|C|2501
7TOQ|1|A25S|G|2502
7TOQ|1|A25S|G|2503
7TOQ|1|A25S|C|2504
7TOQ|1|A25S|C|2505
7TOQ|1|A25S|G|2506
7TOQ|1|A25S|A|2507
7TOQ|1|A25S|U|2508
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain A58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AL02
- uL2
- Chain AL08
- eL8
- Chain AL15
- 60S ribosomal protein L15
- Chain AL25
- uL23
- Chain AL37
- 60S ribosomal protein L37
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