J3_7TOQ_040
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7TOQ|1|A18S|C|1138, 7TOQ|1|A18S|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A18S|C|1094
7TOQ|1|A18S|U|1095
7TOQ|1|A18S|G|1096
*
7TOQ|1|A18S|U|1136
7TOQ|1|A18S|U|1137
7TOQ|1|A18S|C|1138
7TOQ|1|A18S|C|1139
7TOQ|1|A18S|G|1140
*
7TOQ|1|A18S|C|1147
7TOQ|1|A18S|A|1148
7TOQ|1|A18S|A|1149
7TOQ|1|A18S|A|1150
7TOQ|1|A18S|G|1151
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS00
- 40S_SA_C domain-containing protein
- Chain AS13
- 40S ribosomal protein S13
- Chain AS21
- eS21
- Chain AS22
- 40S ribosomal protein S15a
- Chain AS26
- eS26
- Chain AS27
- 40S ribosomal protein S27
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