J3_7TOQ_041
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGUC*GUGCG*CGAUG
- Length
- 15 nucleotides
- Bulged bases
- 7TOQ|1|A25S|C|704, 7TOQ|1|A25S|U|1295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|C|451
7TOQ|1|A25S|A|452
7TOQ|1|A25S|G|453
7TOQ|1|A25S|U|454
7TOQ|1|A25S|C|455
*
7TOQ|1|A25S|G|701
7TOQ|1|A25S|U|702
7TOQ|1|A25S|G|703
7TOQ|1|A25S|C|704
7TOQ|1|A25S|G|705
*
7TOQ|1|A25S|C|1292
7TOQ|1|A25S|G|1293
7TOQ|1|A25S|A|1294
7TOQ|1|A25S|U|1295
7TOQ|1|A25S|G|1296
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL06
- 60S ribosomal protein L6
- Chain AL32
- 60S ribosomal protein L32
- Chain AL33
- 60S ribosomal protein L35a
- Chain EL28
- 60S ribosomal protein L28
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