J3_7TOS_009

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|16S|G|1003
7TOS|1|16S|A|1004
7TOS|1|16S|A|1005
7TOS|1|16S|G|1006
*
7TOS|1|16S|U|1023
7TOS|1|16S|G|1024
7TOS|1|16S|U|1025
7TOS|1|16S|G|1026
7TOS|1|16S|C|1027
7TOS|1|16S|C|1028
*
7TOS|1|16S|G|1033
7TOS|1|16S|G|1034
7TOS|1|16S|A|1035
7TOS|1|16S|A|1036
7TOS|1|16S|C|1037

Current chains

Chain 16S

16S ribosomal RNA

Nearby chains

Chain S14

30S ribosomal protein S14