J3_7U2J_067
3D structure
- PDB id
- 7U2J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7U2J_067 not in the Motif Atlas
- Homologous match to J3_9DFE_013
- Geometric discrepancy: 0.0579
- The information below is about J3_9DFE_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.2
- Basepair signature
- cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7U2J|1|2A|G|1424
7U2J|1|2A|G|1425
7U2J|1|2A|G|1426
7U2J|1|2A|A|1427
7U2J|1|2A|C|1428
7U2J|1|2A|G|1429
*
7U2J|1|2A|C|1564
7U2J|1|2A|C|1565
*
7U2J|1|2A|G|1568
7U2J|1|2A|A|1569
7U2J|1|2A|A|1570
7U2J|1|2A|A|1571
7U2J|1|2A|A|1572
7U2J|1|2A|G|1573
7U2J|1|2A|C|1574
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2D
- 50S ribosomal protein L2
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