J3_7UCK_010

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

7UCK|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|A|2551
7UCK|1|5|G|2552
7UCK|1|5|A|2553
7UCK|1|5|U|2554
7UCK|1|5|G|2555
*
7UCK|1|5|C|2572
7UCK|1|5|A|2573
7UCK|1|5|G|2574
7UCK|1|5|U|2575
*
7UCK|1|5|A|2757
7UCK|1|5|G|2758
7UCK|1|5|G|2759
7UCK|1|5|G|2760
7UCK|1|5|U|2761
7UCK|1|5|G|2762
7UCK|1|5|U|2763
7UCK|1|5|A|2764
7UCK|1|5|A|2765
7UCK|1|5|A|2766
7UCK|1|5|U|2767

Current chains

Chain 5

28s rRNA

Nearby chains

Chain Z

60S ribosomal protein L27