J3_7UG6_007
3D structure
- PDB id
- 7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAC*GCUAAGG*CAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UG6_007 not in the Motif Atlas
- Homologous match to J3_5TBW_007
- Geometric discrepancy: 0.236
- The information below is about J3_5TBW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28621.3
- Basepair signature
- cWW-tWW-tHS-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7UG6|1|1|G|1230
7UG6|1|1|A|1231
7UG6|1|1|C|1232
*
7UG6|1|1|G|1256
7UG6|1|1|C|1257
7UG6|1|1|U|1258
7UG6|1|1|A|1259
7UG6|1|1|A|1260
7UG6|1|1|G|1261
7UG6|1|1|G|1262
*
7UG6|1|1|C|1277
7UG6|1|1|A|1278
7UG6|1|1|C|1279
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain W
- Ribosome assembly factor MRT4
- Chain q
- 60S ribosomal protein L12-A
- Chain r
- Ribosome biogenesis protein NSA2
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