J3_7UG7_014

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GC*GCGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_014 not in the Motif Atlas

Geometric match to J3_5J7L_036

Geometric discrepancy: 0.0672

The information below is about J3_5J7L_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_60031.2

Basepair signature

cWW-cWW-cWW-tWH-tSH-F-F

Number of instances in this motif group

7

Unit IDs

7UG7|1|23|G|30
7UG7|1|23|C|31
*
7UG7|1|23|G|474
7UG7|1|23|C|475
7UG7|1|23|G|476
7UG7|1|23|A|477
7UG7|1|23|A|478
7UG7|1|23|A|479
7UG7|1|23|A|480
7UG7|1|23|G|481
*
7UG7|1|23|C|509
7UG7|1|23|C|510

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LT

50S ribosomal protein L20

Chain LX

50S ribosomal protein L24