3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
GGA*UUUAAAG*CAC
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UG7_018 not in the Motif Atlas
Homologous match to J3_8VTW_003
Geometric discrepancy: 0.2611
The information below is about J3_8VTW_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UG7|1|23|G|1055
7UG7|1|23|G|1056
7UG7|1|23|A|1057
*
7UG7|1|23|U|1081
7UG7|1|23|U|1082
7UG7|1|23|U|1083
7UG7|1|23|A|1084
7UG7|1|23|A|1085
7UG7|1|23|A|1086
7UG7|1|23|G|1087
*
7UG7|1|23|C|1102
7UG7|1|23|A|1103
7UG7|1|23|C|1104

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LJ
50S ribosomal protein L10
Chain LK
50S ribosomal protein L11
Chain Lj
50S ribosomal protein L36

Coloring options:


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