J3_7UG7_020

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

7UG7|1|23|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_020 not in the Motif Atlas

Homologous match to J3_8VTW_005

Geometric discrepancy: 0.1563

The information below is about J3_8VTW_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44702.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7UG7|1|23|C|1306
7UG7|1|23|A|1307
7UG7|1|23|A|1308
7UG7|1|23|G|1309
*
7UG7|1|23|C|1605
7UG7|1|23|C|1606
7UG7|1|23|C|1607
7UG7|1|23|A|1608
7UG7|1|23|A|1609
7UG7|1|23|A|1610
7UG7|1|23|C|1611
*
7UG7|1|23|G|1620
7UG7|1|23|U|1621
7UG7|1|23|G|1622

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Lh

50S ribosomal protein L34