J3_7UG7_024

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

7UG7|1|23|A|2518, 7UG7|1|23|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_024 not in the Motif Atlas

Homologous match to J3_8VTW_008

Geometric discrepancy: 0.1855

The information below is about J3_8VTW_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.4

Basepair signature

cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW

Number of instances in this motif group

4

Unit IDs

7UG7|1|23|C|2517
7UG7|1|23|A|2518
7UG7|1|23|U|2519
7UG7|1|23|C|2520
*
7UG7|1|23|G|2545
7UG7|1|23|U|2546
7UG7|1|23|A|2547
*
7UG7|1|23|U|2561
7UG7|1|23|U|2562
7UG7|1|23|U|2563
7UG7|1|23|A|2564
7UG7|1|23|A|2565
7UG7|1|23|A|2566
7UG7|1|23|G|2567

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LN

50S ribosomal protein L14