3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAUCUA*UCG*CAAG
Length
14 nucleotides
Bulged bases
7UNR|1|A|U|676, 7UNR|1|A|A|782
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UNR_003 not in the Motif Atlas
Homologous match to J3_8VTW_001
Geometric discrepancy: 0.101
The information below is about J3_8VTW_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_39238.5
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

7UNR|1|A|C|673
7UNR|1|A|G|674
7UNR|1|A|A|675
7UNR|1|A|U|676
7UNR|1|A|C|677
7UNR|1|A|U|678
7UNR|1|A|A|679
*
7UNR|1|A|U|763
7UNR|1|A|C|764
7UNR|1|A|G|765
*
7UNR|1|A|C|781
7UNR|1|A|A|782
7UNR|1|A|A|783
7UNR|1|A|G|784

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 6
50S ribosomal protein L34
Chain C
50S ribosomal protein L2

Coloring options:


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