J3_7UNR_003
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAUCUA*UCG*CAAG
- Length
- 14 nucleotides
- Bulged bases
- 7UNR|1|A|U|676, 7UNR|1|A|A|782
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNR_003 not in the Motif Atlas
- Homologous match to J3_8VTW_001
- Geometric discrepancy: 0.101
- The information below is about J3_8VTW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.5
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7UNR|1|A|C|673
7UNR|1|A|G|674
7UNR|1|A|A|675
7UNR|1|A|U|676
7UNR|1|A|C|677
7UNR|1|A|U|678
7UNR|1|A|A|679
*
7UNR|1|A|U|763
7UNR|1|A|C|764
7UNR|1|A|G|765
*
7UNR|1|A|C|781
7UNR|1|A|A|782
7UNR|1|A|A|783
7UNR|1|A|G|784
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
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