J3_7UNR_010
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUC*GUA*UUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7UNR|1|A|A|2505, 7UNR|1|A|U|2506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNR_010 not in the Motif Atlas
- Homologous match to J3_8VTW_008
- Geometric discrepancy: 0.2064
- The information below is about J3_8VTW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.4
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UNR|1|A|C|2504
7UNR|1|A|A|2505
7UNR|1|A|U|2506
7UNR|1|A|C|2507
*
7UNR|1|A|G|2532
7UNR|1|A|U|2533
7UNR|1|A|A|2534
*
7UNR|1|A|U|2548
7UNR|1|A|U|2549
7UNR|1|A|U|2550
7UNR|1|A|A|2551
7UNR|1|A|A|2552
7UNR|1|A|A|2553
7UNR|1|A|G|2554
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L14
- Chain x
- Translation initiation factor IF-2
Coloring options: