3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UG*CACCAGUGG*CGA
Length
14 nucleotides
Bulged bases
7UNR|1|a|U|717
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UNR_016 not in the Motif Atlas
Homologous match to J3_5J7L_003
Geometric discrepancy: 0.1383
The information below is about J3_5J7L_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_11934.4
Basepair signature
cWW-cWW-tWW-cWW-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7UNR|1|a|U|666
7UNR|1|a|G|667
*
7UNR|1|a|C|711
7UNR|1|a|A|712
7UNR|1|a|C|713
7UNR|1|a|C|714
7UNR|1|a|A|715
7UNR|1|a|G|716
7UNR|1|a|U|717
7UNR|1|a|G|718
7UNR|1|a|G|719
*
7UNR|1|a|C|726
7UNR|1|a|G|727
7UNR|1|a|A|728

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain f
30S ribosomal protein S6
Chain k
30S ribosomal protein S11
Chain o
30S ribosomal protein S15
Chain r
30S ribosomal protein S18
Chain u
30S ribosomal protein S21

Coloring options:


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