J3_7UNV_031
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUA*UCUUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 7UNV|1|A|A|2375, 7UNV|1|A|U|2377, 7UNV|1|A|A|2413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNV_031 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.103
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7UNV|1|A|G|2269
7UNV|1|A|U|2270
7UNV|1|A|A|2271
*
7UNV|1|A|U|2371
7UNV|1|A|C|2372
7UNV|1|A|U|2373
7UNV|1|A|U|2374
7UNV|1|A|A|2375
7UNV|1|A|G|2376
7UNV|1|A|U|2377
7UNV|1|A|G|2378
7UNV|1|A|A|2379
7UNV|1|A|U|2380
7UNV|1|A|C|2381
7UNV|1|A|C|2382
*
7UNV|1|A|G|2408
7UNV|1|A|C|2409
7UNV|1|A|U|2410
7UNV|1|A|C|2411
7UNV|1|A|A|2412
7UNV|1|A|A|2413
7UNV|1|A|C|2414
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain N
- 50S ribosomal protein L15
- Chain Y
- 50S ribosomal protein L27
- Chain v
- Transfer RNA; tRNA
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