3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CAAG*CCCAAAC*GUG
Length
14 nucleotides
Bulged bases
7UNW|1|A|A|1599
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UNW_007 not in the Motif Atlas
Homologous match to J3_8VTW_005
Geometric discrepancy: 0.1137
The information below is about J3_8VTW_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_44702.1
Basepair signature
cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
Number of instances in this motif group
2

Unit IDs

7UNW|1|A|C|1293
7UNW|1|A|A|1294
7UNW|1|A|A|1295
7UNW|1|A|G|1296
*
7UNW|1|A|C|1595
7UNW|1|A|C|1596
7UNW|1|A|C|1597
7UNW|1|A|A|1598
7UNW|1|A|A|1599
7UNW|1|A|A|1600
7UNW|1|A|C|1601
*
7UNW|1|A|G|1610
7UNW|1|A|U|1611
7UNW|1|A|G|1612

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 6
50S ribosomal protein L34

Coloring options:


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