J3_7UNW_010
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAUC*GUA*UUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7UNW|1|A|A|2505, 7UNW|1|A|U|2506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNW_010 not in the Motif Atlas
- Homologous match to J3_8VTW_008
- Geometric discrepancy: 0.2052
- The information below is about J3_8VTW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.4
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UNW|1|A|C|2504
7UNW|1|A|A|2505
7UNW|1|A|U|2506
7UNW|1|A|C|2507
*
7UNW|1|A|G|2532
7UNW|1|A|U|2533
7UNW|1|A|A|2534
*
7UNW|1|A|U|2548
7UNW|1|A|U|2549
7UNW|1|A|U|2550
7UNW|1|A|A|2551
7UNW|1|A|A|2552
7UNW|1|A|A|2553
7UNW|1|A|G|2554
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L14
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