3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
UCGGUUC*GGAAA*UA
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UNW_030 not in the Motif Atlas
Homologous match to J3_7A0S_018
Geometric discrepancy: 0.5018
The information below is about J3_7A0S_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_31965.2
Basepair signature
cWW-F-cWW-F-F-F-F-F-cWW-F
Number of instances in this motif group
6

Unit IDs

7UNW|1|A|U|1331
7UNW|1|A|C|1332
7UNW|1|A|G|1333
7UNW|1|A|G|1334
7UNW|1|A|U|1335
7UNW|1|A|U|1336
7UNW|1|A|C|1337
*
7UNW|1|A|G|1368
7UNW|1|A|G|1369
7UNW|1|A|A|1370
7UNW|1|A|A|1371
7UNW|1|A|A|1372
*
7UNW|1|A|U|1389
7UNW|1|A|A|1390

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain V
50S ribosomal protein L23

Coloring options:


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