J3_7UPH_003

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GUA*UACCGGUGG*CGGC

Length

16 nucleotides

Bulged bases

7UPH|1|I|U|722

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|G|670
7UPH|1|I|U|671
7UPH|1|I|A|672
*
7UPH|1|I|U|716
7UPH|1|I|A|717
7UPH|1|I|C|718
7UPH|1|I|C|719
7UPH|1|I|G|720
7UPH|1|I|G|721
7UPH|1|I|U|722
7UPH|1|I|G|723
7UPH|1|I|G|724
*
7UPH|1|I|C|731
7UPH|1|I|G|732
7UPH|1|I|G|733
7UPH|1|I|C|734

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain B

30S ribosomal protein S15

Chain E

30S ribosomal protein S18

Chain H

30S ribosomal protein S21

Chain a

30S ribosomal protein S6

Chain f

30S ribosomal protein S11