J3_7UPH_006

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|U|942
7UPH|1|I|G|943
7UPH|1|I|G|944
7UPH|1|I|A|945
7UPH|1|I|G|946
*
7UPH|1|I|C|1233
7UPH|1|I|U|1234
7UPH|1|I|A|1235
7UPH|1|I|C|1236
*
7UPH|1|I|G|1336
7UPH|1|I|G|1337
7UPH|1|I|A|1338
7UPH|1|I|A|1339

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain b

30S ribosomal protein S7

Chain d

30S ribosomal protein S9

Chain h

30S ribosomal protein S13