J3_7UPH_012

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

AAUGAAC*GAAC*GUUGAU

Length

17 nucleotides

Bulged bases

7UPH|1|I|U|1480, 7UPH|1|I|U|4327

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|A|1478
7UPH|1|I|A|1479
7UPH|1|I|U|1480
7UPH|1|I|G|1481
7UPH|1|I|A|1482
7UPH|1|I|A|1483
7UPH|1|I|C|1484
*
7UPH|1|I|G|4306
7UPH|1|I|A|4307
7UPH|1|I|A|4308
7UPH|1|I|C|4309
*
7UPH|1|I|G|4325
7UPH|1|I|U|4326
7UPH|1|I|U|4327
7UPH|1|I|G|4328
7UPH|1|I|A|4329
7UPH|1|I|U|4330

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain V

50S ribosomal protein L17

Chain i

50S ribosomal protein L32