J3_7UVV_001

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGAUCUA*UAG*CAAG

Length

14 nucleotides

Bulged bases

7UVV|1|A|U|684, 7UVV|1|A|A|790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVV_001 not in the Motif Atlas

Homologous match to J3_7RQB_004

Geometric discrepancy: 0.1851

The information below is about J3_7RQB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_39238.4

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7UVV|1|A|C|681
7UVV|1|A|G|682
7UVV|1|A|A|683
7UVV|1|A|U|684
7UVV|1|A|C|685
7UVV|1|A|U|686
7UVV|1|A|A|687
*
7UVV|1|A|U|771
7UVV|1|A|A|772
7UVV|1|A|G|773
*
7UVV|1|A|C|789
7UVV|1|A|A|790
7UVV|1|A|A|791
7UVV|1|A|G|792

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain C

50S ribosomal protein L2