J3_7UVY_011
3D structure
- PDB id
- 7UVY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7UVY|1|a|A|972, 7UVY|1|a|G|973, 7UVY|1|a|A|975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVY_011 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.0703
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UVY|1|a|U|952
7UVY|1|a|U|953
7UVY|1|a|U|954
7UVY|1|a|A|955
7UVY|1|a|A|956
7UVY|1|a|U|957
7UVY|1|a|U|958
7UVY|1|a|C|959
*
7UVY|1|a|G|970
7UVY|1|a|A|971
7UVY|1|a|A|972
7UVY|1|a|G|973
7UVY|1|a|A|974
7UVY|1|a|A|975
7UVY|1|a|C|976
7UVY|1|a|C|977
7UVY|1|a|U|978
7UVY|1|a|U|979
7UVY|1|a|A|980
7UVY|1|a|C|981
*
7UVY|1|a|G|1218
7UVY|1|a|G|1219
7UVY|1|a|C|1220
7UVY|1|a|U|1221
7UVY|1|a|A|1222
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
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