J3_7UVY_019
3D structure
- PDB id
- 7UVY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- CUUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 7UVY|1|A|U|41, 7UVY|1|A|U|447, 7UVY|1|A|C|455
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVY_019 not in the Motif Atlas
- Homologous match to J3_5J7L_067
- Geometric discrepancy: 0.0661
- The information below is about J3_5J7L_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30040.2
- Basepair signature
- cWW-tWH-F-cWW-tSS-tHH-cSS-tWH-tSW-tHS-cWW-tWH-F-cSH-tSS-F-F
- Number of instances in this motif group
- 7
Unit IDs
7UVY|1|A|C|39
7UVY|1|A|U|40
7UVY|1|A|U|41
7UVY|1|A|G|42
*
7UVY|1|A|C|444
7UVY|1|A|G|445
7UVY|1|A|A|446
7UVY|1|A|U|447
7UVY|1|A|A|448
7UVY|1|A|G|449
7UVY|1|A|U|450
7UVY|1|A|G|451
7UVY|1|A|A|452
7UVY|1|A|A|453
7UVY|1|A|C|454
7UVY|1|A|C|455
7UVY|1|A|A|456
7UVY|1|A|G|457
7UVY|1|A|U|458
7UVY|1|A|A|459
7UVY|1|A|C|460
*
7UVY|1|A|G|467
7UVY|1|A|G|468
7UVY|1|A|A|469
7UVY|1|A|A|470
7UVY|1|A|A|471
7UVY|1|A|G|472
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain P
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L23
Coloring options: