J3_7UW1_012

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UW1_012 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.122

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

7UW1|1|a|C|987
7UW1|1|a|U|988
7UW1|1|a|U|989
7UW1|1|a|G|990
*
7UW1|1|a|C|1042
7UW1|1|a|A|1043
7UW1|1|a|G|1044
*
7UW1|1|a|C|1207
7UW1|1|a|U|1208
7UW1|1|a|U|1209
7UW1|1|a|A|1210
7UW1|1|a|C|1211
7UW1|1|a|G|1212

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14