J3_7V2L_008
3D structure
- PDB id
- 7V2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GACGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7V2L_008 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.085
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.3
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7V2L|1|A|C|1046
7V2L|1|A|G|1047
7V2L|1|A|U|1048
7V2L|1|A|C|1049
7V2L|1|A|A|1050
7V2L|1|A|G|1051
*
7V2L|1|A|C|1090
7V2L|1|A|G|1091
7V2L|1|A|C|1092
7V2L|1|A|A|1093
7V2L|1|A|A|1094
7V2L|1|A|C|1095
7V2L|1|A|C|1096
*
7V2L|1|A|G|1169
7V2L|1|A|A|1170
7V2L|1|A|C|1171
7V2L|1|A|G|1172
7V2L|1|A|A|1173
7V2L|1|A|C|1174
7V2L|1|A|G|1175
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain C
- 30S ribosomal protein S3
- Chain E
- 30S ribosomal protein S5
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
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