J3_7V2Q_003
3D structure
- PDB id
- 7V2Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 7V2Q|1|A|U|707
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7V2Q_003 not in the Motif Atlas
- Homologous match to J3_6CZR_017
- Geometric discrepancy: 0.1501
- The information below is about J3_6CZR_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.3
- Basepair signature
- cWW-F-cWW-F-F-tWW-F-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7V2Q|1|A|U|656
7V2Q|1|A|G|657
*
7V2Q|1|A|C|701
7V2Q|1|A|G|702
7V2Q|1|A|C|703
7V2Q|1|A|C|704
7V2Q|1|A|G|705
7V2Q|1|A|A|706
7V2Q|1|A|U|707
7V2Q|1|A|G|708
7V2Q|1|A|G|709
*
7V2Q|1|A|C|716
7V2Q|1|A|A|717
7V2Q|1|A|G|718
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain F
- 30S ribosomal protein S6
- Chain K
- 30S ribosomal protein S11
- Chain O
- 30S ribosomal protein S15
- Chain R
- 30S ribosomal protein S18
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