J3_7V9E_003

3D structure

PDB id

7V9E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a methyl transferase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.3 Å

Loop

Sequence

CUGACCGACCC*GACAACUAGACAUAC*G(1MA)G

Length

29 nucleotides

Bulged bases

7V9E|1|A|U|39

QA status

Modified nucleotides: 1MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_78095.1

Basepair signature

cWW-F-F-F-F-F-F-tHW-cWW-cWS-cWW-tSW-F-cSW-F-F-F-cWW-F-F-cWW

Number of instances in this motif group

1

Unit IDs

7V9E|1|A|C|6
7V9E|1|A|U|7
7V9E|1|A|G|8
7V9E|1|A|A|9
7V9E|1|A|C|10
7V9E|1|A|C|11
7V9E|1|A|G|12
7V9E|1|A|A|13
7V9E|1|A|C|14
7V9E|1|A|C|15
7V9E|1|A|C|16
*
7V9E|1|A|G|33
7V9E|1|A|A|34
7V9E|1|A|C|35
7V9E|1|A|A|36
7V9E|1|A|A|37
7V9E|1|A|C|38
7V9E|1|A|U|39
7V9E|1|A|A|40
7V9E|1|A|G|41
7V9E|1|A|A|42
7V9E|1|A|C|43
7V9E|1|A|A|44
7V9E|1|A|U|45
7V9E|1|A|A|46
7V9E|1|A|C|47
*
7V9E|1|A|G|62
7V9E|1|A|1MA|63
7V9E|1|A|G|64

Current chains

Chain A

RNA (68-MER)

Nearby chains