J3_7WTM_007

3D structure

PDB id

7WTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

7WTM|1|C2|A|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTM|1|C2|A|213
7WTM|1|C2|G|214
7WTM|1|C2|A|215
7WTM|1|C2|U|216
7WTM|1|C2|A|217
7WTM|1|C2|A|218
7WTM|1|C2|A|219
7WTM|1|C2|A|220
7WTM|1|C2|A|221
7WTM|1|C2|A|222
7WTM|1|C2|U|223
7WTM|1|C2|C|224
7WTM|1|C2|A|225
7WTM|1|C2|A|226
7WTM|1|C2|U|227
7WTM|1|C2|G|228
*
7WTM|1|C2|C|237
7WTM|1|C2|U|238
7WTM|1|C2|C|239
7WTM|1|C2|U|240
7WTM|1|C2|U|241
7WTM|1|C2|U|242
7WTM|1|C2|G|243
*
7WTM|1|C2|C|250
7WTM|1|C2|A|251
7WTM|1|C2|U|252

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4-A

Chain SG

40S ribosomal protein S6-A

Chain SI

40S ribosomal protein S8-A

Chain SL

40S ribosomal protein S11-A