J3_7WTU_007

3D structure

PDB id

7WTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGGA*UAC*G(G7M)AA

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTU|1|2|U|1225
7WTU|1|2|G|1226
7WTU|1|2|G|1227
7WTU|1|2|A|1228
*
7WTU|1|2|U|1530
7WTU|1|2|A|1531
7WTU|1|2|C|1532
*
7WTU|1|2|G|1638
7WTU|1|2|G7M|1639
7WTU|1|2|A|1640
7WTU|1|2|A|1641

Current chains

Chain 2

18S rRNA

Nearby chains

Chain F

40S ribosomal protein S5

Chain K

RRP12-like protein

Chain T

40S ribosomal protein S19

Chain q

Probable 18S rRNA (guanine-N(7))-methyltransferase