J3_7Z34_011

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGCCUUGGUC*GGCCUUGGUAG*CGUCGC

Length

28 nucleotides

Bulged bases

7Z34|1|1|G|1962, 7Z34|1|1|A|2060, 7Z34|1|1|G|2076, 7Z34|1|1|G|2079

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z34|1|1|G|1961
7Z34|1|1|G|1962
7Z34|1|1|G|1963
7Z34|1|1|C|1964
7Z34|1|1|C|1965
7Z34|1|1|U|1966
7Z34|1|1|U|1967
7Z34|1|1|G|1968
7Z34|1|1|G|1969
7Z34|1|1|U|1970
7Z34|1|1|C|1971
*
7Z34|1|1|G|2051
7Z34|1|1|G|2052
7Z34|1|1|C|2053
7Z34|1|1|C|2054
7Z34|1|1|U|2055
7Z34|1|1|U|2056
7Z34|1|1|G|2057
7Z34|1|1|G|2058
7Z34|1|1|U|2059
7Z34|1|1|A|2060
7Z34|1|1|G|2061
*
7Z34|1|1|C|2075
7Z34|1|1|G|2076
7Z34|1|1|U|2077
7Z34|1|1|C|2078
7Z34|1|1|G|2079
7Z34|1|1|C|2080

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain U

60S ribosomal protein L22-A