J3_7Z34_026
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CACACAAUAUAGAUG*CAUAGCAGG*CGAAUUGCAAUGUCAUUUUGCGUG
- Length
- 48 nucleotides
- Bulged bases
- 7Z34|1|1|C|3164, 7Z34|1|1|A|3165, 7Z34|1|1|U|3169, 7Z34|1|1|U|3171, 7Z34|1|1|A|3172, 7Z34|1|1|G|3173, 7Z34|1|1|A|3215, 7Z34|1|1|C|3217, 7Z34|1|1|A|3268, 7Z34|1|1|U|3270, 7Z34|1|1|U|3275, 7Z34|1|1|G|3276, 7Z34|1|1|U|3277
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Z34|1|1|C|3162
7Z34|1|1|A|3163
7Z34|1|1|C|3164
7Z34|1|1|A|3165
7Z34|1|1|C|3166
7Z34|1|1|A|3167
7Z34|1|1|A|3168
7Z34|1|1|U|3169
7Z34|1|1|A|3170
7Z34|1|1|U|3171
7Z34|1|1|A|3172
7Z34|1|1|G|3173
7Z34|1|1|A|3174
7Z34|1|1|U|3175
7Z34|1|1|G|3176
*
7Z34|1|1|C|3212
7Z34|1|1|A|3213
7Z34|1|1|U|3214
7Z34|1|1|A|3215
7Z34|1|1|G|3216
7Z34|1|1|C|3217
7Z34|1|1|A|3218
7Z34|1|1|G|3219
7Z34|1|1|G|3220
*
7Z34|1|1|C|3265
7Z34|1|1|G|3266
7Z34|1|1|A|3267
7Z34|1|1|A|3268
7Z34|1|1|U|3269
7Z34|1|1|U|3270
7Z34|1|1|G|3271
7Z34|1|1|C|3272
7Z34|1|1|A|3273
7Z34|1|1|A|3274
7Z34|1|1|U|3275
7Z34|1|1|G|3276
7Z34|1|1|U|3277
7Z34|1|1|C|3278
7Z34|1|1|A|3279
7Z34|1|1|U|3280
7Z34|1|1|U|3281
7Z34|1|1|U|3282
7Z34|1|1|U|3283
7Z34|1|1|G|3284
7Z34|1|1|C|3285
7Z34|1|1|G|3286
7Z34|1|1|U|3287
7Z34|1|1|G|3288
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain E
- 60S ribosomal protein L6-A
- Chain M
- 60S ribosomal protein L14-A
- Chain O
- 60S ribosomal protein L16-A
- Chain P
- 60S ribosomal protein L17-A
- Chain f
- 60S ribosomal protein L33-A
Coloring options: