J3_7Z34_031

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CA*UAACU*AG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7Z34_031 not in the Motif Atlas

Homologous match to J3_8CRE_017

Geometric discrepancy: 0.245

The information below is about J3_8CRE_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_75962.2

Basepair signature

cWW-cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7Z34|1|1|C|1631
7Z34|1|1|A|1632
*
7Z34|1|1|U|1641
7Z34|1|1|A|1642
7Z34|1|1|A|1643
7Z34|1|1|C|1644
7Z34|1|1|U|1645
*
7Z34|1|1|A|1810
7Z34|1|1|G|1811

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27-A

Chain g

60S ribosomal protein L34-A