J3_7Z3N_030
3D structure
- PDB id
- 7Z3N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAUAGCGCACAAGUAG*CGAAAG*CUUG
- Length
- 27 nucleotides
- Bulged bases
- 7Z3N|1|1|U|336, 7Z3N|1|1|A|344, 7Z3N|1|4|U|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Z3N_030 not in the Motif Atlas
- Homologous match to J3_8P9A_045
- Geometric discrepancy: 0.1035
- The information below is about J3_8P9A_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07616.1
- Basepair signature
- cWW-cSS-tSS-tSW-tHW-cWW-tWH-F-F-tHH-tSS-tWH-F-tHS-cWW-F-cSH
- Number of instances in this motif group
- 10
Unit IDs
7Z3N|1|1|C|333
7Z3N|1|1|G|334
7Z3N|1|1|A|335
7Z3N|1|1|U|336
7Z3N|1|1|A|337
7Z3N|1|1|G|338
7Z3N|1|1|C|339
7Z3N|1|1|G|340
7Z3N|1|1|C|341
7Z3N|1|1|A|342
7Z3N|1|1|C|343
7Z3N|1|1|A|344
7Z3N|1|1|A|345
7Z3N|1|1|G|346
7Z3N|1|1|U|347
7Z3N|1|1|A|348
7Z3N|1|1|G|349
*
7Z3N|1|1|C|356
7Z3N|1|1|G|357
7Z3N|1|1|A|358
7Z3N|1|1|A|359
7Z3N|1|1|A|360
7Z3N|1|1|G|361
*
7Z3N|1|4|C|21
7Z3N|1|4|U|22
7Z3N|1|4|U|23
7Z3N|1|4|G|24
Current chains
- Chain 1
- 26S rRNA
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Lj
- Ribosomal protein L37
- Chain Ll
- Ribosomal protein eL39
- Chain NC
- Nascent chain
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