J3_7ZAG_005
3D structure
- PDB id
- 7ZAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZAG|1|2|U|915
7ZAG|1|2|G|916
7ZAG|1|2|G|917
7ZAG|1|2|A|918
*
7ZAG|1|2|U|1209
7ZAG|1|2|A|1210
7ZAG|1|2|C|1211
*
7ZAG|1|2|G|1311
7ZAG|1|2|G|1312
7ZAG|1|2|A|1313
7ZAG|1|2|A|1314
Current chains
- Chain 2
- rRNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain H
- 30S ribosomal protein S7
- Chain K
- 30S ribosomal protein S9
- Chain O
- 30S ribosomal protein S13
- Chain U
- 30S ribosomal protein S19e
Coloring options: